miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Physcomitrella patens



ABOUT THIS RECORD

ID: MNEST006967
species: Physcomitrella patens
miRNA family: MIRf541
source: miRNEST

Taxonomy by NCBI:
Physcomitrella patens Physcomitrella Funariaceae Funariales Funariidae Bryopsida Moss Superclass V Bryophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CTGCGGGCAGCAGGACCCACA

miRNA*
GGGCTAGCTCCCGTAGTG

mismatches: 3
bulges: 2

View larger
pre-miRNA
CCCCGGTCTCCTCGGGCTAGCTCCCGTAGTGGCTCCTGTGGTAGCCCCTGTGGTGGCTCCAGTGGTAGCGCCGGTCGCTGCAACTCCGACAGCTACTCCC
ACAATTGCACCCACAACTCCGGCTCCCGGCTTCAACTCCAGTGACGGGCCCCTGCGGGCAGCAGGACCCACAGGCATGGAAC


dot-bracket secondary structure
..(((....(((.(((((.((((((((((.(((((.(((((..((...((((((((((..(((.((((((.....)))))).))).....)))))...))
)))...))..)))))...((((...))))..(((.......))).))))).))))))).))).)).)))..)))..)))...



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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